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4YCS

Crystal structure of putative lipoprotein from Peptoclostridium difficile 630 (fragment)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2013-08-20
DetectorADSC QUANTUM 315r
Wavelength(s)0.97915
Spacegroup nameP 21 21 21
Unit cell lengths37.755, 119.501, 185.912
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 1.980
R-factor0.18067
Rwork0.180
R-free0.22628
Structure solution methodSAD
RMSD bond length0.015
RMSD bond angle1.457
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareAuto-Rickshaw
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.010
High resolution limit [Å]1.9801.980
Rmerge0.1230.848
Number of reflections57544
<I/σ(I)>12.42.25
Completeness [%]96.897
Redundancy4.84.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP72890.09 M Malonic Acid, 0.013 M Ammonium Citrate Tribasic, 0.006 M Succinic Acid, 0.015 M DL-Malic Acid, 0.02 M Sodium Acetate, 0.025 M Sodium Formate, 0.008 M Ammonium Tartrate Dibasic, 0.1 M HEPES:NaOH pH 7.0, 10% (w/v) PEG MME 5000, cryo 25% glycerol

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