4YAZ
3',3'-cGAMP riboswitch bound with 3',3'-cGAMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.623, 50.517, 78.657 |
Unit cell angles | 90.00, 90.92, 90.00 |
Refinement procedure
Resolution | 42.504 - 2.000 |
R-factor | 0.2144 |
Rwork | 0.212 |
R-free | 0.24960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3irw |
RMSD bond length | 0.010 |
RMSD bond angle | 1.202 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 78.300 | 2.160 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.051 | |
Number of reflections | 32313 | |
<I/σ(I)> | 13.5 | 1.6 |
Completeness [%] | 98.3 | 99 |
Redundancy | 3.3 | 3.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.5 | 293 | 0.1 M Na/K-phosphate, pH 6.2-6.6, 0.2 M NaCl and 40-45% PEG400. |