4YAD
Crystal structure of TRIM24 PHD-bromodomain complexed with 2,4-dimethoxy-N-(1-methyl-2-oxo-1,2,3,4-tetrahydroquinolin-6-yl)benzene-1-sulfonamide (3b)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-25 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.1159 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 89.350, 36.950, 129.280 |
Unit cell angles | 90.00, 110.03, 90.00 |
Refinement procedure
Resolution | 60.730 - 1.730 |
R-factor | 0.177 |
Rwork | 0.176 |
R-free | 0.20800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3o34 |
RMSD bond length | 0.020 |
RMSD bond angle | 2.051 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.3.11) |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 60.730 | 60.730 | 1.760 |
High resolution limit [Å] | 1.730 | 8.990 | 1.730 |
Rmerge | 0.107 | 0.073 | 0.604 |
Rpim | 0.063 | 0.042 | 0.353 |
Total number of observations | 160235 | 1223 | 8772 |
Number of reflections | 41834 | ||
<I/σ(I)> | 8.8 | 16.9 | 2.2 |
Completeness [%] | 99.7 | 99.1 | 100 |
Redundancy | 3.8 | 3.7 | 3.9 |
CC(1/2) | 0.988 | 0.991 | 0.785 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 2.2-2.4M ammonium sulfate, 0.1M HEPES buffer pH 7.5, 2% PEG400 and 8-9% glycerol |