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4Y9T

CRYSTAL STRUCTURE OF AN ABC TRANSPORTER SOLUTE BINDING PROTEIN (IPR025997) FROM AGROBACTERIUM VITIS S4 (Avi_5305, TARGET EFI-511224) WITH BOUND ALPHA-D-GLUCOSAMINE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-11-12
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameP 21 21 21
Unit cell lengths36.634, 63.611, 127.394
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution24.035 - 1.801
R-factor0.1499
Rwork0.148
R-free0.18920
Structure solution methodSAD
RMSD bond length0.011
RMSD bond angle1.321
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareSHELX
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]100.000100.0001.830
High resolution limit [Å]1.8004.8901.800
Rmerge0.1350.1240.740
Rmeas0.1410.1290.768
Rpim0.0380.0350.203
Total number of observations333857
Number of reflections25086
<I/σ(I)>7.2
Completeness [%]88.297.887.1
Redundancy13.313.213.6
CC(1/2)0.9930.899
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5298Protein (40.65 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-glucosamine); Reservoir (35 %(w/v) PEG 4000); Cryoprotection (Reservoir, Pause in air during transfer to liquid N2)

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