Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Y4Z

Endothiapepsin in complex with fragment 73

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyCCD
Collection date2012-11-17
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.91841
Spacegroup nameP 1 21 1
Unit cell lengths45.307, 73.387, 52.861
Unit cell angles90.00, 109.51, 90.00
Refinement procedure
Resolution34.860 - 1.480
R-factor0.1251
Rwork0.123
R-free0.15740
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3pcw
RMSD bond length0.005
RMSD bond angle1.072
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.4_1492)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]42.7101.570
High resolution limit [Å]1.4801.480
Rmerge0.492
Number of reflections54295
<I/σ(I)>16.63
Completeness [%]99.899.5
Redundancy4.24.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.62900.1 M ammonium acetate, 0.1 M sodium acetate, 24-30% PEG 4000, crystals obtained by streak-seeding

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon