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4Y27

E.coli 23S Sarcin-Ricil Loop, modified with a 2-Me on G2661 and a methylphosphonate on A2662

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06DA
Synchrotron siteSLS
BeamlineX06DA
Temperature [K]100
Detector technologyPIXEL
Collection date2014-12-20
DetectorDECTRIS PILATUS 2M
Wavelength(s)0.77491
Spacegroup nameP 43
Unit cell lengths29.500, 29.500, 77.150
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.500 - 0.998
R-factor0.1361
Rwork0.135
R-free0.14880
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3dvz
RMSD bond length0.016
RMSD bond angle1.579
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwarePHENIX ((phenix.refine: 1.8.4_1496))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.020
High resolution limit [Å]0.9980.998
Rmerge0.0583.697
Number of reflections35632
<I/σ(I)>35.151.01
Completeness [%]99.898
Redundancy12.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Crystals were grown for two weeks at 20C by mixing one volume of RNA sample with one volume of a crystallization buffer made with ammonium sulfate 2.5 M, magnesium acetate 10 mM and 2-(N-morpholino)ethanesulfonic acid (MES) pH 5.6 50 mM.

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