4Y1O
Oceanobacillus iheyensis group II intron domain 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-08-04 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97950 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 84.345, 132.250, 84.561 |
Unit cell angles | 90.00, 91.87, 90.00 |
Refinement procedure
Resolution | 40.250 - 2.950 |
R-factor | 0.1811 |
Rwork | 0.179 |
R-free | 0.22380 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | model from an isomorphous crystal |
RMSD bond length | 0.005 |
RMSD bond angle | 1.099 |
Data reduction software | XDS (January 10, 2014) |
Data scaling software | XDS (January 10, 2014) |
Phasing software | PHASER (2.5.2) |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.250 | 3.060 |
High resolution limit [Å] | 2.950 | 2.950 |
Number of reflections | 75788 | |
<I/σ(I)> | 19.31 | 1.65 |
Completeness [%] | 98.7 | 94.95 |
Redundancy | 6.8 | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298.15 | 80 mM NaCl, 24 mM KCl, 5 mM MgCl2, 40 mM NaCacodylate, 17% MPD, 8 mM spermine-4HCl |