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4Y01

Crystal structure of dipeptidyl peptidase 11 (DPP11) from Porphyromonas gingivalis

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]95
Detector technologyCCD
Collection date2012-12-20
DetectorADSC QUANTUM 270
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths99.788, 115.486, 147.570
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.000 - 2.460
R-factor0.1866
Rwork0.184
R-free0.23339
Structure solution methodMAD
RMSD bond length0.015
RMSD bond angle1.757
Phasing softwareSHARP
Refinement softwareREFMAC (5.8.0103)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.520
High resolution limit [Å]2.4602.460
Number of reflections62234
<I/σ(I)>12.62.1
Completeness [%]99.699.5
Redundancy6.63.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP9293BICINE pH 9.0, sodium chloride, PEG MME 550

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