4XYO
Structure of AgrA LytTR domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-12 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.97625 |
Spacegroup name | P 2 21 21 |
Unit cell lengths | 31.270, 45.670, 95.450 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.000 - 2.000 |
R-factor | 0.19442 |
Rwork | 0.193 |
R-free | 0.23312 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4g4k |
RMSD bond length | 0.010 |
RMSD bond angle | 1.339 |
Data reduction software | SCALA |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.000 | |
High resolution limit [Å] | 2.000 | |
Rmerge | 0.597 | |
Number of reflections | 9581 | |
<I/σ(I)> | 15.9 | 4.6 |
Completeness [%] | 98.0 | 95.5 |
Redundancy | 12.3 | 11.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 2% Tacsimate pH 7.0, 0.1M HEPES pH 7.5, 20% w/v PEG 3350, 40% v/v acetone |