4XVT
Crystal structure of HIV-1 93TH057 coreE gp120 with antibody 45-VRC01.H01+07.O-863513/45-VRC01.L01+07.O-110653 (VRC07_1995)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-02-17 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 64.647, 67.841, 199.219 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.106 - 1.690 |
R-factor | 0.1831 |
Rwork | 0.181 |
R-free | 0.22230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ngb |
RMSD bond length | 0.017 |
RMSD bond angle | 1.823 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.110 | 1.760 |
High resolution limit [Å] | 1.690 | 1.700 |
Rmerge | 0.137 | |
Number of reflections | 97827 | |
<I/σ(I)> | 13 | 1.08 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 9.6 | 6.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 294 | 0.1 M Na Cacodylate pH 6.5, 12% PEG 8000, 0.16 M NaAcetate. |