Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4XNR

Vibrio Vulnificus Adenine Riboswitch Aptamer Domain, Synthesized by Position-selective Labeling of RNA (PLOR), in Complex with Adenine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2014-04-30
DetectorADSC QUANTUM 315r
Wavelength(s)0.9793
Spacegroup nameP 21 21 2
Unit cell lengths49.482, 154.682, 25.178
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.130 - 2.210
R-factor0.21
Rwork0.200
R-free0.22000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4tzx
RMSD bond length0.001
RMSD bond angle0.274
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: dev_1839))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.5002.290
High resolution limit [Å]2.2102.210
Rmerge0.0611.040
Number of reflections10358
<I/σ(I)>16.921.67
Completeness [%]100.099
Redundancy6.66.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5277Mg, PEG, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 277K

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon