4XMG
Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8 complexed with imidazole
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-12-20 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.8 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.264, 66.747, 38.561 |
Unit cell angles | 90.00, 116.50, 90.00 |
Refinement procedure
Resolution | 34.245 - 1.800 |
R-factor | 0.18 |
Rwork | 0.178 |
R-free | 0.21700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3mvf |
RMSD bond length | 0.008 |
RMSD bond angle | 1.157 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 2011_08_24_1020)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.250 | 1.850 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.083 | 0.439 |
Number of reflections | 15836 | |
<I/σ(I)> | 9.2 | 3 |
Completeness [%] | 97.6 | 96.9 |
Redundancy | 3.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 25%(w/v) PEG 3350, 0.1 M bis-Tris propane pH 7.8. 0.25%(w/v) hexamminecobalt(III) chloride, 0.25%(w/v) salicylamide, 0.25%(w/v) sulfanilamide, 0.25%(w/v) vanilic acid, 0.02 M HEPES sodium pH 6.8. |