4XMF
Crystal structure of nitrophorin 7 from Rhodnius prolixus at pH 7.8 complexed with histamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.2 |
Synchrotron site | BESSY |
Beamline | 14.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-09-26 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.91841 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.338, 66.722, 38.825 |
Unit cell angles | 90.00, 116.87, 90.00 |
Refinement procedure
Resolution | 30.740 - 1.600 |
R-factor | 0.1609 |
Rwork | 0.158 |
R-free | 0.20710 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3mvf |
RMSD bond length | 0.007 |
RMSD bond angle | 1.024 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((phenix.refine: 2011_08_24_1020)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.740 | 1.640 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.067 | 0.780 |
Number of reflections | 22417 | |
<I/σ(I)> | 15.3 | 1.9 |
Completeness [%] | 96.9 | 95.5 |
Redundancy | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 277 | 25%(w/v) PEG 3350, 0.1 M bis-Tris propane pH 7.8, 0.25%(w/v) Gly-Gly, 0.25%(w/v) Gly-Gly-Gly, 0.25%(w/v) Gly- Gly-Gly-Gly, 0.25%(w/v) pentaglycine, 0.02 M HEPES sodium pH 6.8. |