Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4XLL

Toxoplasma gondii DJ-1, oxidized

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyPIXEL
Collection date2013-05-26
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.979450
Spacegroup nameP 1 21 1
Unit cell lengths38.777, 55.181, 75.247
Unit cell angles90.00, 93.92, 90.00
Refinement procedure
Resolution38.690 - 2.080
R-factor0.1736
Rwork0.169
R-free0.21880
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015
RMSD bond angle1.668
Data reduction softwareXDS (VERSION July 4, 2012)
Data scaling softwareXSCALE (VERSION July 4, 2012)
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]38.6932.140
High resolution limit [Å]2.0809.3102.080
Rmerge0.0920.0240.338
Rmeas0.0990.0260.368
Total number of observations127624
Number of reflections186382321258
<I/σ(I)>16.9658.355.25
Completeness [%]97.298.790.3
Redundancy6.846.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP72911:1 5mg/mL protein in 10 mM HEPES 7.0, 100 mM NaCl, 10 mM DTT mixed with reservoir: 1.5 M ammonium citrate tribasic

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon