4XKN
Crystal structure of NikA from Staphylococcus aureus in complex with Ni(L-His)2 (co-crystallization with Ni(II) and L-Histidine)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM30A |
Synchrotron site | ESRF |
Beamline | BM30A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-12-07 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979621 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 62.490, 67.200, 115.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.760 - 1.850 |
R-factor | 0.152 |
Rwork | 0.150 |
R-free | 0.19200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4ofj |
RMSD bond length | 0.008 |
RMSD bond angle | 1.106 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((PHENIX.REFINE: 1.9_1692)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.760 | 1.950 |
High resolution limit [Å] | 1.850 | 1.850 |
Number of reflections | 42182 | |
<I/σ(I)> | 16.89 | 2.94 |
Completeness [%] | 99.8 | 99.2 |
Redundancy | 7 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293.15 | 27% PEG 3350, 0.1 M HEPES pH 7.0 - protein pre-incubated with 2 and 4 molar equivalents of NiCl2 and L-histidine, respectively. |