4XKG
Crystal structure of hemagglutinin from Taiwan (2013) H6N1 influenza virus in complex with 6'-SLN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-04-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.03320 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 185.460, 99.064, 133.671 |
Unit cell angles | 90.00, 126.47, 90.00 |
Refinement procedure
Resolution | 49.532 - 2.250 |
R-factor | 0.2106 |
Rwork | 0.208 |
R-free | 0.25410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xkd |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.290 |
High resolution limit [Å] | 2.250 | 6.100 | 2.250 |
Rmerge | 0.082 | 0.051 | 0.309 |
Rmeas | 0.098 | 0.061 | 0.371 |
Rpim | 0.054 | 0.033 | 0.203 |
Total number of observations | 290644 | ||
Number of reflections | 90738 | ||
<I/σ(I)> | 8.8 | ||
Completeness [%] | 97.5 | 98.1 | 94.9 |
Redundancy | 3.2 | 3.2 | 3.1 |
CC(1/2) | 0.995 | 0.875 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 293.15 | 10mM NiCl2, 0.1M Tris pH 8.5, 20% (w/v) MPEG 2000 and 20% glycerol |