4XK0
Crystal structure of a tetramolecular RNA G-quadruplex in potassium
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | ALS BEAMLINE 5.0.2 |
| Synchrotron site | ALS |
| Beamline | 5.0.2 |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-08-26 |
| Detector | ADSC QUANTUM 315r |
| Wavelength(s) | 0.8266 |
| Spacegroup name | P 4 21 2 |
| Unit cell lengths | 33.133, 33.133, 54.843 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 21.540 - 1.080 |
| Rwork | 0.144 |
| R-free | 0.14400 |
| Structure solution method | SAD |
| Data scaling software | HKL-2000 |
| Phasing software | SHELX |
| Refinement software | PHENIX |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.090 |
| High resolution limit [Å] | 1.070 | 2.900 | 1.070 |
| Rmerge | 0.112 | 0.128 | 0.187 |
| Rmeas | 0.117 | 0.135 | 0.198 |
| Rpim | 0.034 | 0.041 | 0.061 |
| Total number of observations | 310744 | ||
| Number of reflections | 25610 | ||
| <I/σ(I)> | 31.8 | ||
| Completeness [%] | 97.4 | 95.5 | 53.5 |
| Redundancy | 12.1 | 11.3 | 9.4 |
| CC(1/2) | 0.982 | 0.981 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 294 | 40 mM potassium cacodylic acid (pH 6.0), 35% 2-methyl-2,4-pentanediol, 5 mM spermine hydrochloride, 80 mM potassium chloride, 0.5 mM DHX36 fragment, 20 mM barium chloride |






