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4XFE

Crystal structure of a TRAP periplasmic solute binding protein from Pseudomonas putida F1 (Pput_1203), Target EFI-500184, with bound D-glucuronate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-10-13
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameC 1 2 1
Unit cell lengths130.001, 35.054, 60.833
Unit cell angles90.00, 99.54, 90.00
Refinement procedure
Resolution26.503 - 1.400
R-factor0.1577
Rwork0.156
R-free0.18620
RMSD bond length0.010
RMSD bond angle1.361
Data scaling softwareAimless (0.1.27)
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]59.99059.9901.430
High resolution limit [Å]1.4007.4101.400
Rmerge0.1230.0880.780
Rpim0.0600.0520.381
Total number of observations266420100013874
Number of reflections53215
<I/σ(I)>9.216.62.3
Completeness [%]99.271.799.9
Redundancy53.55
CC(1/2)0.9950.9800.722
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5298Protein (60.0 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-glucuronate); Reservoir (MCSG2(D3), 0.2M Lithium Sulfate, 0.1 M CAPS pH 10.5, 2.0 M Ammonium Sulfate); Cryoprotection (80% Reservoir, 20% glycerol)

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