4XDA
Vibrio cholerae O395 Ribokinase complexed with Ribose, ADP and Sodium ion.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM14 |
Synchrotron site | ESRF |
Beamline | BM14 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-02-12 |
Detector | MAR CCD 130 mm |
Wavelength(s) | 0.973 |
Spacegroup name | P 1 |
Unit cell lengths | 59.420, 70.700, 79.880 |
Unit cell angles | 106.29, 97.65, 98.68 |
Refinement procedure
Resolution | 27.420 - 1.750 |
R-factor | 0.1885 |
Rwork | 0.186 |
R-free | 0.22490 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.278 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8_1069)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 27.420 | 1.840 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.617 | |
Number of reflections | 117286 | |
<I/σ(I)> | 8.4 | 2.3 |
Completeness [%] | 96.2 | 94.3 |
Redundancy | 4 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | PEG 6000, MES buffer 0.1mM was used as precipitant. Crystal grown in 7 days. |