4XBK
2-deoxyribose-5-phosphate aldolase from Lactobacillus brevis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-04-10 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 96.882, 96.882, 119.593 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.898 - 1.951 |
R-factor | 0.1629 |
Rwork | 0.162 |
R-free | 0.17840 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.061 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | HKL-2000 |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.020 |
High resolution limit [Å] | 1.950 | 4.200 | 1.950 |
Rmerge | 0.103 | 0.055 | 0.684 |
Rmeas | 0.105 | 0.056 | 0.697 |
Rpim | 0.020 | 0.011 | 0.133 |
Total number of observations | 1158340 | ||
Number of reflections | 42101 | ||
<I/σ(I)> | 15.1 | ||
Completeness [%] | 99.9 | 99.6 | 100 |
Redundancy | 27.5 | 26.3 | 27.2 |
CC(1/2) | 0.999 | 0.955 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4.6 | 291.15 | ammonium acetate, sodium acetate |