4X84
Crystal structure of Ribose-5-phosphate isomerase A from Pseudomonas aeruginosa
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-10-29 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.97856 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.070, 142.790, 161.210 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.649 - 1.250 |
R-factor | 0.1385 |
Rwork | 0.138 |
R-free | 0.15740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3enq |
RMSD bond length | 0.005 |
RMSD bond angle | 1.108 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.280 | |
High resolution limit [Å] | 1.250 | 5.590 | 1.250 |
Rmerge | 0.068 | 0.035 | 0.495 |
Rmeas | 0.076 | 0.040 | 0.555 |
Total number of observations | 1258596 | ||
Number of reflections | 261250 | 3096 | 19231 |
<I/σ(I)> | 14 | 36.71 | 3.22 |
Completeness [%] | 99.6 | 94.5 | 99.9 |
Redundancy | 4.8 | 4.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 290 | Moledular Dimensions, Morpheus screen G4: 20mM each Na-Formate; NH4-Acetate; Na3-Citrate; NaKTartrate (racemic); Na-Oxamate; 12.5% each MPD (racemic); PEG 1K; PEG 3350; 100mM Imidazole; MES (acid) pH 6.5; PsaeA.00944.a.B1.PS02170 at 29.9mg/ml; direct cryo; tray 258189, puck frv7-1 |