4X32
Bacteriorhodopsin ground state structure collected in cryo conditions from crystals obtained in LCP with PEG as a precipitant.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-15 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.0 |
Spacegroup name | P 63 |
Unit cell lengths | 60.525, 60.525, 101.480 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 52.420 - 1.900 |
R-factor | 0.1737 |
Rwork | 0.172 |
R-free | 0.21430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2ntu |
RMSD bond length | 0.009 |
RMSD bond angle | 1.223 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.570 | 46.570 | 1.940 |
High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
Rmerge | 0.095 | 0.021 | 1.867 |
Rpim | 0.026 | 0.006 | 0.496 |
Total number of observations | 234541 | 2117 | 15314 |
Number of reflections | 16643 | ||
<I/σ(I)> | 17.9 | 68.6 | 1.8 |
Completeness [%] | 100.0 | 99.4 | 100 |
Redundancy | 14.1 | 12.9 | 14.3 |
CC(1/2) | 1.000 | 1.000 | 0.548 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIPIDIC CUBIC PHASE | 5.6 | 294 | 27% PEG2000, 100 mM phosphate buffer pH 5.6 |