4X2L
Crystal structure of human BACE-1 bound to Compound 6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-06-17 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 103.420, 103.420, 168.330 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 89.570 - 2.550 |
R-factor | 0.191 |
Rwork | 0.188 |
R-free | 0.23850 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.120 |
Data scaling software | SCALA (3.3.16) |
Refinement software | BUSTER-TNT (BUSTER 2.11.5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 168.327 | 168.327 | 2.690 |
High resolution limit [Å] | 2.550 | 8.070 | 2.550 |
Rmerge | 0.032 | 0.420 | |
Rmeas | 0.098 | ||
Rpim | 0.023 | 0.009 | 0.143 |
Total number of observations | 307377 | 10699 | 26306 |
Number of reflections | 18008 | ||
<I/σ(I)> | 28.5 | 67.9 | 4.7 |
Completeness [%] | 100.0 | 99.9 | 100 |
Redundancy | 17.1 | 15.5 | 10.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.9 | 298 | 20% PEG5000MME, 200 mM NaI, 200 mM NaCitrate, PH 6.9, BACE (8.3 mg/ml in 20 mM Tris, 250 mM NaCl, pH 7.5) |