4WXT
X-ray crystal structure of thioredoxin from Mycobacterium avium
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-10-17 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.87872 |
Spacegroup name | P 1 |
Unit cell lengths | 26.070, 29.860, 31.080 |
Unit cell angles | 82.64, 87.64, 66.84 |
Refinement procedure
Resolution | 5.400 - 1.200 |
R-factor | 0.1582 |
Rwork | 0.157 |
R-free | 0.17720 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 2i1u |
RMSD bond length | 0.010 |
RMSD bond angle | 1.352 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | PHENIX ((phenix.refine: dev_1839)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 5.400 | 1.230 |
High resolution limit [Å] | 1.200 | 1.200 |
Rmerge | 0.253 | |
Number of reflections | 25241 | |
<I/σ(I)> | 21.8 | 7.3 |
Completeness [%] | 94.5 | 91.4 |
Redundancy | 7.8 | 7.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 289 | JCSG+ b2: 20% PEG 3350 0.2 M sodium thiocyanate |