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4WVG

Crystal structure of the Type-I signal peptidase from Staphylococcus aureus (SpsB).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX1
Synchrotron siteAustralian Synchrotron
BeamlineMX1
Temperature [K]100
Detector technologyCCD
Collection date2013-03-25
DetectorADSC QUANTUM 210r
Wavelength(s)0.9537
Spacegroup nameP 1 21 1
Unit cell lengths57.683, 63.565, 79.892
Unit cell angles90.00, 92.59, 90.00
Refinement procedure
Resolution19.440 - 2.050
R-factor0.1921
Rwork0.190
R-free0.24200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1anf
RMSD bond length0.007
RMSD bond angle1.160
Data scaling softwareXDS
Phasing softwarePHASER (2.5.2)
Refinement softwareREFMAC (5.8.0071)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.44019.4402.110
High resolution limit [Å]2.0508.9402.050
Rmerge0.2110.0271.577
Rpim0.0820.0110.608
Total number of observations275184293721095
Number of reflections36318
<I/σ(I)>10.159.21.4
Completeness [%]99.891.199.8
Redundancy7.66.97.6
CC(1/2)0.9940.9990.528
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29612 % PEG 8000, 20 % ethylene glycol, 0.2 M amino acids mix (0.2 M sodium-L-glutamate, 0.2 M DL-alanine, 0.2 M glycine, 0.2 M DL-lysine, 0.2 M DL-serine), 100 mM Tris.Cl pH 8.5

224004

PDB entries from 2024-08-21

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