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4WT7

Crystal structure of an ABC transporter solute binding protein (IPR025997) from Agrobacterium vitis (Avi_5165, Target EFI-511223) with bound allitol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-10-15
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameC 2 2 21
Unit cell lengths77.080, 83.930, 189.080
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.800 - 2.000
R-factor0.1861
Rwork0.184
R-free0.23010
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3l49
RMSD bond length0.013
RMSD bond angle1.489
Data reduction softwareMOSFLM
Data scaling softwareAimless (0.1.27)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]25.88025.8802.050
High resolution limit [Å]2.0008.9402.000
Rmerge0.1160.0400.318
Rpim0.0320.0120.085
Total number of observations563578660745186
Number of reflections38991
<I/σ(I)>15.831.17.4
Completeness [%]93.195.9100
Redundancy14.512.814.7
CC(1/2)0.9980.9990.984
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5298protein (29.0 mg/mL, 10 mM HEPES, pH 7.5, 5 mM DTT, 10 mM allitol), reservoir (0.2 M lithium chloride, 20% w/v PEG3350), cryoprotection (80% reservoir + 20% glycerol)

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PDB entries from 2024-05-15

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