4WSK
Crystal structure of a bacterial fucosidase with phenyl((1R,2R,3R,4R,5R,6R)-2,3,4-trihydroxy-5-methyl-7-azabicyclo[4.1.0]heptan-7-yl)methanone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-02-02 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.650, 186.520, 98.150 |
Unit cell angles | 90.00, 94.20, 90.00 |
Refinement procedure
Resolution | 97.890 - 1.920 |
R-factor | 0.1849 |
Rwork | 0.182 |
R-free | 0.23180 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4jfv |
RMSD bond length | 0.019 |
RMSD bond angle | 1.818 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.2.17) |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.200 | 53.200 | 1.950 |
High resolution limit [Å] | 1.920 | 10.520 | 1.920 |
Rmerge | 0.102 | 0.061 | 0.909 |
Rpim | 0.058 | 0.038 | 0.539 |
Total number of observations | 579846 | 3700 | 26407 |
Number of reflections | 199312 | ||
<I/σ(I)> | 7 | 16.7 | 1.8 |
Completeness [%] | 96.9 | 98.6 | 96.7 |
Redundancy | 4 | 3.9 | 3.7 |
CC(1/2) | 0.990 | 0.968 | 0.544 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291.15 | 0.1 M imidazole pH 7.0, 0.2 M ammonium sulfate, 20% PEG 3350 |