4WEX
Catalytic domain of mouse 2',3'-cyclic nucleotide 3'- phosphodiesterase, with mutation Y168S
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PETRA III, EMBL c/o DESY BEAMLINE P14 (MX2) |
Synchrotron site | PETRA III, EMBL c/o DESY |
Beamline | P14 (MX2) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-05-18 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 1.223 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.170, 48.240, 51.220 |
Unit cell angles | 90.00, 95.62, 90.00 |
Refinement procedure
Resolution | 50.974 - 2.100 |
R-factor | 0.2011 |
Rwork | 0.199 |
R-free | 0.23850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2xmi |
RMSD bond length | 0.003 |
RMSD bond angle | 0.700 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 60.000 | 2.150 | |
High resolution limit [Å] | 2.100 | 9.380 | 2.100 |
Rmerge | 0.106 | 0.026 | 0.705 |
Rmeas | 0.125 | 0.031 | 0.856 |
Total number of observations | 38913 | ||
Number of reflections | 10929 | 136 | 768 |
<I/σ(I)> | 8.75 | 25.7 | 1.93 |
Completeness [%] | 99.5 | 100 | 95.9 |
Redundancy | 3.6 | 3.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | Na-acetate, PEG 4000/6000 |