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4WEC

Crystal structure of a Short chain dehydrogenase from Mycobacterium smegmatis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyCCD
Collection date2012-09-18
DetectorADSC QUANTUM 315r
Wavelength(s)0.9774
Spacegroup nameP 1 21 1
Unit cell lengths68.900, 96.640, 81.540
Unit cell angles90.00, 101.94, 90.00
Refinement procedure
Resolution41.330 - 1.550
R-factor0.1667
Rwork0.165
R-free0.19610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1iy8 modified with CCP4 program CHAINSAW
RMSD bond length0.009
RMSD bond angle1.070
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (3.15)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0001.590
High resolution limit [Å]1.5506.9301.550
Rmerge0.0510.0170.488
Rmeas0.0600.0200.571
Total number of observations546099
Number of reflections147821166810777
<I/σ(I)>17.1653.222.98
Completeness [%]97.794.896.5
Redundancy3.73.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5290EmeraldBio JCSG+ screen E9: 1.6 M Magnesium sulfate, 0.1 M MES pH 6.5; MysmA.00391.b.A1.PS00660 at 21.3mg/ml; cryo: 25% ethylene glycol; tray 236637e9, puck vsr8-15

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