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4WBY

tRNA-processing enzyme (apo form I)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-17A
Synchrotron sitePhoton Factory
BeamlineBL-17A
Temperature [K]95
Detector technologyCCD
Collection date2010-05-18
DetectorADSC QUANTUM 270
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths54.510, 67.740, 127.500
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.940 - 1.500
R-factor0.1568
Rwork0.156
R-free0.17610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1vfg
RMSD bond length0.005
RMSD bond angle0.958
Data reduction softwareXDS
Data scaling softwareXSCALE
Refinement softwarePHENIX ((phenix.refine: 1.8.4_1496))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.0001.540
High resolution limit [Å]1.5006.7101.500
Rmerge0.0400.0310.382
Rmeas0.0430.0340.404
Total number of observations719782
Number of reflections759667525526
<I/σ(I)>30.4254.596.13
Completeness [%]99.577.699.4
Redundancy9.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293PEG3350, potassium sulfate

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