4WB8
Crystal structure of human cAMP-dependent protein kinase A (catalytic alpha subunit), exon 1 deletion
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X4C |
Synchrotron site | NSLS |
Beamline | X4C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-25 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 72.808, 75.864, 80.644 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.274 - 1.550 |
R-factor | 0.1642 |
Rwork | 0.163 |
R-free | 0.18440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2gfc |
RMSD bond length | 0.011 |
RMSD bond angle | 1.335 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.580 |
High resolution limit [Å] | 1.550 | 4.210 | 1.550 |
Rmerge | 0.050 | 0.027 | 0.667 |
Rmeas | 0.055 | 0.029 | 0.745 |
Rpim | 0.023 | 0.012 | 0.325 |
Total number of observations | 363415 | ||
Number of reflections | 65054 | ||
<I/σ(I)> | 11.7 | ||
Completeness [%] | 99.0 | 98.3 | 91.1 |
Redundancy | 5.6 | 5.5 | 4.6 |
CC(1/2) | 0.998 | 0.763 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 295 | 10% PEG 8000, 0.1M HEPES pH 7.5 |