Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4W5C

Crystal structure analysis of cruzain with three Fragments: 1 (N-(1H-benzimidazol-2-yl)-1,3-dimethyl-pyrazole-4-carboxamide), 6 (2-amino-4,6-difluorobenzothiazole) and 9 (N-(1H-benzimidazol-2-yl)-3-(4-fluorophenyl)-1H-pyrazole-4-carboxamide).

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyCCD
Collection date2012-12-08
DetectorADSC QUANTUM 315r
Wavelength(s)1.115
Spacegroup nameP 43 21 2
Unit cell lengths137.790, 137.790, 166.480
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.980 - 3.270
R-factor0.195
Rwork0.193
R-free0.23600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3kku
RMSD bond length0.010
RMSD bond angle1.255
Data reduction softwareMOSFLM
Data scaling softwareXSCALE
Refinement softwarePHENIX ((PHENIX.REFINE: 1.8_1069))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.000
High resolution limit [Å]3.270
Rmerge0.080
Number of reflections25366
<I/σ(I)>17.82.89
Completeness [%]98.499.1
Redundancy8.17.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52930.1M Hepes pH 7.5, 1.2M K/Na Tartrate

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon