4V4X
Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-04-26 |
Detector | MAR CCD 225 mm |
Wavelength(s) | 0.98014 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 509.520, 509.520, 804.940 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 300.000 - 5.000 |
R-factor | 0.266 |
Rwork | 0.263 |
R-free | 0.32300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.015 |
RMSD bond angle | 2.065 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 300.000 | 5.090 |
High resolution limit [Å] | 5.000 | 5.000 |
Rmerge | 0.078 | |
Number of reflections | 223223 | |
<I/σ(I)> | 9.1 | 2.7 |
Completeness [%] | 99.2 | 99.2 |
Redundancy | 7.9 | 7.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | MPD, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | MPD | ||
2 | 1 | 1 | H2O | ||
3 | 1 | 2 | MPD | ||
4 | 1 | 2 | H2O |