4UB2
DNA polymerase beta product complex with a templating cytosine and 8-oxodGMP, 120 s
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-01-09 |
Detector | RIGAKU SATURN 92 |
Wavelength(s) | 1.54 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 55.099, 79.589, 55.668 |
Unit cell angles | 90.00, 109.69, 90.00 |
Refinement procedure
Resolution | 27.400 - 2.510 |
R-factor | 0.2291 |
Rwork | 0.226 |
R-free | 0.29250 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fms |
RMSD bond length | 0.005 |
RMSD bond angle | 0.975 |
Refinement software | PHENIX ((phenix.refine: 1.7_650)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.550 |
High resolution limit [Å] | 2.510 | 2.510 |
Rmerge | 0.076 | 0.623 |
Number of reflections | 25637 | |
<I/σ(I)> | 17.6 | 2.2 |
Completeness [%] | 99.5 | 99.7 |
Redundancy | 3.6 | 3.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 291 | 50 mM imidazole, 350 mM sodium chloride, 17% PEG3350, pH 8.0 |