4UAV
Crystal structure of CbbY (AT3G48420) from Arabidobsis thaliana
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-10-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.000 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 47.725, 140.041, 87.107 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.300 |
R-factor | 0.1381 |
Rwork | 0.136 |
R-free | 0.17200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4uar |
RMSD bond length | 0.023 |
RMSD bond angle | 2.086 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | MOLREP (10.2.35) |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 70.021 | 45.174 | 1.370 |
High resolution limit [Å] | 1.300 | 4.110 | 1.300 |
Rmerge | 0.023 | 0.624 | |
Rmeas | 0.058 | ||
Rpim | 0.029 | 0.014 | 0.370 |
Total number of observations | 257575 | 8464 | 35885 |
Number of reflections | 70347 | ||
<I/σ(I)> | 13.2 | 41.2 | 2.1 |
Completeness [%] | 97.9 | 98.5 | 95.3 |
Redundancy | 3.7 | 3.5 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 291 | 25 % (wt/vol) PEG-6000 and 0.1 M Tris-HCl pH 8.5 |