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4U9B

Crystal structure of an H-NOX protein from S. oneidensis in the Fe(II)NO ligation state

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2012-07-07
DetectorADSC QUANTUM 315r
Wavelength(s)1.11
Spacegroup nameP 21 21 2
Unit cell lengths67.636, 86.716, 33.822
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.818 - 1.650
R-factor0.1693
Rwork0.168
R-free0.20270
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4u99
RMSD bond length0.019
RMSD bond angle0.864
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.8181.740
High resolution limit [Å]1.6501.650
Rmerge0.0290.487
Number of reflections45550
<I/σ(I)>14.41.7
Completeness [%]98.599.5
Redundancy3.93.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293Obtained by equilibrating a 2 or 4 uL drop of 1:1 protein: reservoir against 700 uL reservoir containing 0.7 M NaH2PO4, 0.9 M K2HPO4. Cryoprotection was achieved by carefully adding equal drop volume of mother liquor containing 50% glycerol. Crystals were then transferred into mother liquor containing 30% glycerol and flash frozen in liquid nitrogen. All crystal growth and manipulation was performed anaerobically.

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