Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4U78

Octameric RNA duplex soaked in copper(II)chloride

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X06SA
Synchrotron siteSLS
BeamlineX06SA
Temperature [K]100
Detector technologyPIXEL
Collection date2013-10-27
DetectorDECTRIS PILATUS 2M
Wavelength(s)1.37
Spacegroup nameH 3
Unit cell lengths46.810, 46.810, 53.380
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution32.280 - 1.501
R-factor0.1773
Rwork0.174
R-free0.20610
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4u3l
RMSD bond length0.036
RMSD bond angle0.403
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.8.2_1309))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.2801.553
High resolution limit [Å]1.5001.500
Rmerge0.0320.350
Number of reflections6864
<I/σ(I)>46.454.5
Completeness [%]98.490.32
Redundancy12.65
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5293.1528% PEG 400, 0.2 M calcium chloride, 0.002 M spermine, 0.05 M hepes sodium buffer, pH 7.5

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon