4U3R
Octameric RNA duplex co-crystallized with cobalt(II)chloride
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X06SA |
Synchrotron site | SLS |
Beamline | X06SA |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-10-27 |
Detector | DECTRIS PILATUS 2M |
Wavelength(s) | 1.61 |
Spacegroup name | H 3 |
Unit cell lengths | 46.977, 46.977, 53.300 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 32.339 - 1.701 |
R-factor | 0.168 |
Rwork | 0.165 |
R-free | 0.19760 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4u3l |
RMSD bond length | 0.019 |
RMSD bond angle | 0.401 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.340 | 1.760 |
High resolution limit [Å] | 1.701 | 1.701 |
Rmerge | 0.037 | 0.091 |
Number of reflections | 4678 | |
<I/σ(I)> | 55.81 | 12.1 |
Completeness [%] | 96.8 | 84.68 |
Redundancy | 15.7 | 4.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293.15 | 25% MPD, 0.02 M magnesium sulfate, 0.0005 M spermine, 0.05 M potassium cacodylate pH 6.0 |