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4U13

Crystal structure of putative polyketide cyclase (protein SMa1630) from Sinorhizobium meliloti at 2.3 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-G
Synchrotron siteAPS
Beamline21-ID-G
Temperature [K]100
Detector technologyCCD
Collection date2013-11-11
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97856
Spacegroup nameP 1 21 1
Unit cell lengths47.764, 42.295, 62.287
Unit cell angles90.00, 111.83, 90.00
Refinement procedure
Resolution50.000 - 2.300
R-factor0.1942
Rwork0.193
R-free0.22380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3fh1
RMSD bond length0.017
RMSD bond angle1.689
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwareHKL-3000
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.340
High resolution limit [Å]2.3006.2402.300
Rmerge0.0700.0490.674
Total number of observations38669
Number of reflections10379
<I/σ(I)>12.92.1
Completeness [%]99.398.692.5
Redundancy3.73.33.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52890.2 ul of 18 mg/ml protein in 20 mM HEPES pH 7.5, 150 mM NaCl, 10% Glycerol, 0.1% Sodium Azide and 0.5 mM TCEP were mixed with 0.2 ul of the MCSG condition #96 (0.2 M Lithium Sulfate, 0.1 M HEPES:NaOH pH 7.5, 25% (w/v) PEG 3350) and equilibrated against 1.5 M NaCl solution in 96 Well 3 drop Crystallization Plate (Swissci). Before crystallization protein was incubated with 1/50 v/v of 2 mg/ml chymotrypsin solution at 289 K for 3 hours.

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