4TVZ
Crystal Structure of SCARB2 in Neural Condition (pH7.5)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-08 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 1.0 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 94.960, 63.723, 219.925 |
Unit cell angles | 90.00, 99.75, 90.00 |
Refinement procedure
Resolution | 34.883 - 3.006 |
R-factor | 0.2616 |
Rwork | 0.259 |
R-free | 0.30440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4f7b |
RMSD bond length | 0.006 |
RMSD bond angle | 1.604 |
Data reduction software | SCALEPACK |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 6.460 | 3.000 |
Rmerge | 0.131 | 0.072 | 0.637 |
Number of reflections | 24297 | ||
<I/σ(I)> | 5.6 | ||
Completeness [%] | 92.7 | 98.2 | 93.8 |
Redundancy | 3.4 | 3.4 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 289 | 0.1 mol/L HEPES, 25%(w/v) PEG 3350 |