4TQG
Crystal structure of Megavirus UDP-GlcNAc 4,6-dehydratase, 5-epimerase Mg534
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-07-04 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.8729 |
Spacegroup name | P 63 2 2 |
Unit cell lengths | 153.509, 153.509, 60.680 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.377 - 2.200 |
R-factor | 0.1954 |
Rwork | 0.193 |
R-free | 0.23240 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4j2o |
RMSD bond length | 0.007 |
RMSD bond angle | 1.156 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.377 | 38.377 | 2.320 |
High resolution limit [Å] | 2.200 | 6.960 | 2.200 |
Rmerge | 0.024 | 0.299 | |
Rmeas | 0.094 | ||
Rpim | 0.036 | 0.011 | 0.127 |
Total number of observations | 150564 | 4885 | 19931 |
Number of reflections | 21901 | ||
<I/σ(I)> | 15.5 | 28.5 | 6 |
Completeness [%] | 100.0 | 99.3 | 100 |
Redundancy | 6.9 | 6.1 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | malic acid 0.1M, PEG 3350 22-25% (w/v) |