4TMP
Crystal structure of AF9 YEATS bound to H3K9ac peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2013-09-12 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9793 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 42.537, 195.704, 106.675 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.926 - 2.300 |
R-factor | 0.1656 |
Rwork | 0.162 |
R-free | 0.22880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3fk3 |
RMSD bond length | 0.013 |
RMSD bond angle | 1.271 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP (11.2.05) |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.121 | 0.056 | 0.765 |
Total number of observations | 219747 | ||
Number of reflections | 20468 | ||
<I/σ(I)> | 10.3 | 6.32 | |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 10.7 | 9.8 | 10.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 291 | 20% PEG4000, 5% 2-Propanol, 0.1 M Sodium Citrate Tribasic Dihydrate |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 291 | 20% PEG4000, 5% 2-Propanol, 0.1 M Sodium Citrate Tribasic Dihydrate |