4RZD
Crystal Structure of a PreQ1 Riboswitch
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2010-02-19 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 84.083, 84.083, 278.365 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.294 - 2.750 |
R-factor | 0.2138 |
Rwork | 0.212 |
R-free | 0.22770 |
Structure solution method | SIRAS |
RMSD bond length | 0.002 |
RMSD bond angle | 0.554 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | SOLVE |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.400 | 2.850 |
High resolution limit [Å] | 2.750 | 2.750 |
Rmerge | 0.034 | 0.500 |
Number of reflections | 25223 | |
<I/σ(I)> | 14.8 | 1.4 |
Completeness [%] | 94.2 | 79.3 |
Redundancy | 2.6 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 85% Tacsimate pH 7.0, 0.010 M Mg(C2H3O2)2, 0.006 M Co(NH3)6Cl3, and 0.001 M spermine HCl, VAPOR DIFFUSION, HANGING DROP, temperature 293K |