4RXX
Crystal Structure of the N-terminal Domain of Human Ubiquitin Specific Protease 38
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-06 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97932 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 41.985, 102.039, 135.281 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.060 |
R-factor | 0.1906 |
Rwork | 0.189 |
R-free | 0.24190 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.324 |
Data reduction software | HKL-3000 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.100 |
High resolution limit [Å] | 2.060 | 5.590 | 2.060 |
Rmerge | 0.127 | 0.076 | 0.820 |
Number of reflections | 37072 | ||
<I/σ(I)> | 22.9 | ||
Completeness [%] | 99.8 | 100 | 97.3 |
Redundancy | 9.7 | 9.4 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | Protein sample was first mixed Hampton Research Additive Screen H03 40% in 10:1 (V/V) Protein:1,3-propanediol ratio, then set up with 15% PEG8000, 0.2 M MgCl2, 0.1 M HEPES, pH 7.5, vapor diffusion, hanging drop, temperature 291K, VAPOR DIFFUSION, HANGING DROP |