4RUV
Crystal structure of thioredoxin 2 from Staphylococcus aureus NCTC8325
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2014-09-15 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 41 |
Unit cell lengths | 31.376, 31.376, 94.804 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.920 - 1.930 |
R-factor | 0.17297 |
Rwork | 0.170 |
R-free | 0.23936 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fa4 |
RMSD bond length | 0.018 |
RMSD bond angle | 1.937 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER (2.5.0) |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 18.920 | 18.961 | 2.030 |
High resolution limit [Å] | 1.926 | 6.090 | 1.930 |
Rmerge | 0.052 | 0.286 | |
Number of reflections | 6850 | ||
<I/σ(I)> | 6.2 | 10.1 | 2.5 |
Completeness [%] | 98.2 | 96.7 | 89.1 |
Redundancy | 3.5 | 3.5 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 0.1 M Na-HEPES pH 7.5, 1.4 M sodium citrate tribasic dihydrate , VAPOR DIFFUSION, SITTING DROP, temperature 298K |