Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4RUM

Crystal structure of the NiCo transition-metal riboswitch bound to cobalt

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2012-09-10
DetectorADSC QUANTUM 315
Wavelength(s)0.9917
Spacegroup nameI 4 2 2
Unit cell lengths95.790, 95.790, 229.986
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.867 - 2.643
R-factor0.1976
Rwork0.194
R-free0.23110
Structure solution methodSAD
RMSD bond length0.006
RMSD bond angle1.238
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSHARP
Refinement softwarePHENIX ((phenix.refine: 1.8.4_1496))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.700
High resolution limit [Å]2.6402.640
Number of reflections16067
<I/σ(I)>41.11.93
Completeness [%]99.8100
Redundancy14.314.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729810% v/v methyl pentanediol, 40 mM sodium cacodylate pH 7.0, 12 mM spermine tetrahydrochloride, 40 mM lithium chloride and 80 mM strontium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 298K

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon