4RUM
Crystal structure of the NiCo transition-metal riboswitch bound to cobalt
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-09-10 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9917 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 95.790, 95.790, 229.986 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.867 - 2.643 |
R-factor | 0.1976 |
Rwork | 0.194 |
R-free | 0.23110 |
Structure solution method | SAD |
RMSD bond length | 0.006 |
RMSD bond angle | 1.238 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SHARP |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.700 |
High resolution limit [Å] | 2.640 | 2.640 |
Number of reflections | 16067 | |
<I/σ(I)> | 41.1 | 1.93 |
Completeness [%] | 99.8 | 100 |
Redundancy | 14.3 | 14.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 10% v/v methyl pentanediol, 40 mM sodium cacodylate pH 7.0, 12 mM spermine tetrahydrochloride, 40 mM lithium chloride and 80 mM strontium chloride, VAPOR DIFFUSION, HANGING DROP, temperature 298K |