4RFB
1.93 Angstrom Crystal Structure of Superantigen-like Protein from Staphylococcus aureus in Complex with Sialyl-Lewis X.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-03-20 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97875 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.640, 108.199, 167.655 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.830 - 1.930 |
R-factor | 0.17106 |
Rwork | 0.169 |
R-free | 0.21829 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3v05 |
RMSD bond length | 0.011 |
RMSD bond angle | 1.637 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.960 |
High resolution limit [Å] | 1.930 | 1.930 |
Rmerge | 0.074 | 0.552 |
Number of reflections | 61498 | |
<I/σ(I)> | 19.3 | 3 |
Completeness [%] | 99.7 | 100 |
Redundancy | 4.9 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 295 | Protein: 7.4mG/mL, 0.25M Sodium chloride, 0.01M Tris-HCl (pH 8.3); Screen: PEGsII (F12), 0.8M Lithium chloride, 0.1M Tris (pH 8.5), 32% (w/v) PEG 4000, VAPOR DIFFUSION, SITTING DROP, temperature 295K |