4RDT
Structure of the bacterial Zn-transporter ZnuD from Neisseria meningitidis (flexible conformation bound to a zinc ion)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-08-22 |
Detector | ADSC Q315 detector |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 101.340, 156.227, 158.075 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.928 - 3.200 |
R-factor | 0.2718 |
Rwork | 0.270 |
R-free | 0.30470 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.552 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.230 |
High resolution limit [Å] | 3.200 | 9.300 | 3.190 |
Rmerge | 0.134 | 0.048 | 0.661 |
Number of reflections | 50916 | ||
<I/σ(I)> | 4.8 | ||
Completeness [%] | 99.9 | 98.9 | 99.8 |
Redundancy | 8.1 | 6.8 | 8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 300 | 0.1M Hepes pH 7.2, 1M Magnesium Sulfate, vapor diffusion, hanging drop, temperature 300K |