4R5Y
The complex structure of Braf V600E kinase domain with a novel Braf inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 93 |
Detector technology | CCD |
Collection date | 2013-11-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979073 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.395, 101.601, 109.786 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.180 - 3.500 |
R-factor | 0.2288 |
Rwork | 0.225 |
R-free | 0.30580 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.936 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.370 |
High resolution limit [Å] | 3.250 | 7.000 | 3.250 |
Rmerge | 0.216 | 0.066 | 0.513 |
Number of reflections | 8975 | ||
<I/σ(I)> | 6.9 | ||
Completeness [%] | 98.0 | 99.3 | 96.8 |
Redundancy | 7 | 6.5 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 0.1 M Bis-Tris, pH 6.5, 23% PEG3350, 0.2 M magnesium chloride, VAPOR DIFFUSION, SITTING DROP, temperature 277K |