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4QXA

Crystal structure of the Rab9A-RUTBC2 RBD complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2013-12-22
DetectorADSC QUANTUM 315r
Wavelength(s)0.9789
Spacegroup nameP 21 21 21
Unit cell lengths52.776, 59.944, 127.840
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.725 - 2.300
R-factor0.1831
Rwork0.181
R-free0.23280
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yzl
RMSD bond length0.009
RMSD bond angle1.216
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.7.2_869)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.380
High resolution limit [Å]2.3004.9502.300
Rmerge0.0790.0440.354
Number of reflections18655
<I/σ(I)>12.9
Completeness [%]98.792.8100
Redundancy5.75.26
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP52890.2M ammonium acetate, 0.1M sodium acetate, 20% (w/v) PEG 4000, pH 5.0, vapor diffusion, hanging drop, temperature 289K

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